Genetics reveal the origin story of East Asia’s favorite sweet bean

The origin of red beans — also called adzuki — has been murky. A new study says Japan is where it all started.

Jun 27, 2025 - 19:30
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Genetics reveal the origin story of East Asia’s favorite sweet bean

Genome sleuthing finds that purple beans had been first domesticated in Japan, no longer China

A pile of purple (adzuki) beans

Adzuki beans, which primary person in loads of East Asian desserts, had been first domesticated in Japan 3,000 to 5,000 years previously.

keithferrisphoto/Getty Pictures

Tucked internal mochi, swirled into moon desserts or layered under custard in taiyaki, a sweet paste product of purple beans is a beloved staple in East Asia. No matter its fame, the origins of the bean (commonly continuously known as adzuki) earn long been contested.

After examining almost 700 wild and cultivated adzuki genomes across Asia, scientists earn now traced the plant’s domestication to Japan between 3,000 and 5,000 years previously, with its unfold and diversification in China going down later. The work, revealed in the May 29 Science, also identifies the genetic mutations in the help of the bean’s signature rich purple hue.

“I used to be greatly surprised by in most cases every part,” says Cheng-Ruei Lee, an evolutionary geneticist at Nationwide Taiwan College in Taipei.

Adzuki beans grow in pods on furry crops and earn a naturally sweet, nutty model. Fossilized beans counsel early cultivation by Japan’s Jomon folks, hunter-gatherers who lived as early as 16,000 years previously. Nevertheless genetic clues pointed to China as a substitute, the put cultivars showed the increased genetic diversity traditional of older domestication.

The new stare discovered that whereas Chinese cultivars perform inform essentially the most diversity in their nuclear genomes (DNA that’s inherited from each and each dad and mom), their chloroplast genomes­ (DNA handed down maternally that evolves extra slowly) closely match those of wild Jap beans.

“The very best technique to reconcile these competing tips,” Lee says, is that if the beans had been first domesticated in Japan and later unfold to China, the put “they hybridized with native, wild Chinese purple beans and got grand increased diversity.”

For the length of this route of, adzuki beans also got a makeover. Wild beans are pale with darkish mottled spots, whereas cultivated forms are uniformly purple. The team diagnosed one genetic mutation that suppresses pigment processing, inflicting purple pigments to salvage across the seed coat, and another gene deletion that eliminates the mottled sample.

To assign terminate when these traits took off, the team tracked the evolutionary trajectory of those two mutations alongside a third mutation that reduces the potentialities of a pod shattering start — beneficial for farmers however no longer for wild crops, which count on pods bursting to unfold seeds. The researchers discovered that each and each three mutations began to poke upwards around 10,000 years previously, long sooner than domestication in Japan.

These traits offer cramped advantage in the wild, Lee says. Their early unfold may as a substitute replicate human intellectual preferences. Crimson, long regarded as lucky, also colored Jomon lacquer pottery.

The findings bolster proof that the Jomon had been bigger than foragers. “If there had been folks that thought the outdated archaeological proof wasn’t convincing,” Lee says, “right here is proof from plant genetics too.”

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